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Core workflow

Main entry points for parsing names, checking setup, and running the full reconciliation pipeline.

classify_spnames() experimental
Classify Scientific Plant Names into Taxonomic Components
wcvp_matching() experimental
Match Scientific Names Against WCVP
wcvp_setup_info()
Check Default Backbone Setup

Matching stages

Lower-level helpers that expose the staged matching strategy used internally by the main pipeline.

wcvp_direct_match() experimental
Direct Match Species & Genus Binomial or Trinomial names
wcvp_genus_match() experimental
Match Genus name
wcvp_fuzzy_match_genus() experimental
Fuzzy Match Genus Name
wcvp_direct_match_species_within_genus() experimental
Direct Match Species within Genus
wcvp_fuzzy_match_species_within_genus() experimental
Fuzzy Match Species within Genus
wcvp_suffix_match_species_within_genus() experimental
Suffix Match Species within Genus

Backbone utilities

Utilities for prefiltering and indexing a WCVP-like target backbone.

build_genus_index() experimental
Build a Genus Index for Fast Prefiltering
prefilter_target_by_genus() experimental
Prefilter Target Backbone by Input Genera (Exact + Fuzzy)

Example data

fia
Cleaned Master Tree Species List from FIA