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Package overview and data

Package-level documentation, packaged datasets, and helpers for loading or citing MDD data.

rmdd rmdd-package
rmdd: Mammal Diversity Database Tools
mdd_download() stable
Download a Mammal Diversity Database file
mdd_load() stable
Load an MDD comma-separated export
mdd_cache_dir() stable
Return the default rmdd cache directory
mdd_reference() stable
Reference citations for the Mammal Diversity Database
mdd_checklist
Current Mammal Diversity Database checklist
mdd_synonyms
Mammal Diversity Database synonym table
mdd_type_specimen_metadata
Mammal Diversity Database type specimen metadata
mdd_checklist_records() stable
Return checklist records in a normalized tibble
mdd_synonym_records() stable
Return synonym records in a normalized tibble
mdd_release_records() stable
Return release records used by rmdd

Name parsing and reconciliation

Tools for parsing mammal names and resolving them against accepted names, synonyms, and original combinations in MDD.

classify_mammal_names() experimental
Classify mammal scientific names into taxonomic components
build_mdd_match_backbone() experimental
Build an MDD reconciliation backbone
mdd_name_index() experimental
Build a normalized MDD name index
mdd_matching() experimental
Reconcile mammal names against MDD

Taxon retrieval

Functions for retrieving structured accepted-taxon summaries and detailed taxon records.

mdd_taxon_record() experimental
Retrieve a normalized MDD taxon record
mdd_taxon_info() experimental
Retrieve structured MDD taxon information by name

Distribution and mapping

Functions for summarizing and mapping MDD geographic distribution data.

mdd_distribution_summary_raw() experimental
Summarize mammal diversity by country, continent, or subregion
mdd_distribution_summary() experimental
Summarize mammal diversity by country, continent, or subregion
mdd_distribution_map() experimental
Generate a distribution map from MDD country distributions

S3 methods

Printing and coercion helpers for rmdd objects.

print(<mdd_reference>)
Print mdd_reference object
print(<mdd_taxon_info>)
Print mdd_taxon_info object
as.list(<mdd_taxon_info>)
Convert mdd_taxon_info to list